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SAPPHIRE.CNN: Implementation of dRNA-seq-driven, species-specific promoter prediction using convolutional neural networks. Coppens L, Wicke L, Lavigne R. Comput Struct Biotechnol J. 2022 Sep 9;20:4969-4974. doi: 10.1016/j.csbj.2022.09.006. eCollection 2022.
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Transcriptional Organization of the Salmonella Typhimurium Phage P22 pid ORFan Locus. Wolput S, Makumi A, Wicke L, Bäcker LE, Cenens W, Briers Y, Wenner NA, Owen SV, Hinton JCD, Lavigne R, Aertsen A. Int J Mol Sci. 2022 Jan 23;23(3):1253. doi: 10.3390/ijms23031253.
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Introducing differential RNA-seq mapping to track the early infection phase for Pseudomonas phage ɸKZ. Wicke L, Ponath F, Coppens L, Gerovac M, Lavigne R, Vogel J. RNA Biol. 2020 Oct 25:1-12. doi: 10.1080/15476286.2020.1827785. Online ahead of print.
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A Grad-seq View of RNA and Protein Complexes in Pseudomonas aeruginosa under Standard and Bacteriophage Predation Conditions.Gerovac M, Wicke L, Chihara K, Schneider C, Lavigne R, Vogel J. mBio. 2021 Feb 9;12(1):e03454-20. doi: 10.1128/mBio.03454-20.
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| Last update Publications 24.09.2022 |
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